The genotypes were double-checked by two people for quality contr

The genotypes were double-checked by two people for quality control, and any uncertain results were repeated to reach a 100% concordance. Genotyping of 10% of

samples were randomly performed twice, and no discrepancy was observed. Table 1 Primers and PCR conditions for genotyping the five SNPs rs number   Primers Annealing Adriamycin mouse Temperature (°C) PCR products (bp) Enzyme Digested PCR products (bp) rs2623047 FP 5′-TGT GGC AAA CAG TGA AGA GC-3 52 245 BstNI GG:159/86 G>A RP 5′-CAG CAA GAC GTT TTC CCT TC-3′       GA:245/159/86             AA:245 rs13264163 FP 5′-TGG CAA TTT TGC TCT TTT CC-3′ 55 181 NspI AA:100/81 A>G RP 5′-TGA CAT AGA GTG CCC AGG TG-3       GA:181/100/81             GG:181 G rs6990375 FP 5′-CCG CAG AAC ACC GAA GTA AT-3′ 55 227 HhaI GG:128/99 G>A RP 5′-CCA GGG TAG CTT GGA ATG TT-3       GA:227/128/99             AA:227 rs3802278 FP 5′-CTG GAA ACC GAT TTC AGT GG-3′ 55 227 Cac8I GG:151/76 G>A RP 5′-CCC GCT ATG CTG GAA TTA CT-3       GA:227/151/76    

        AA:227 rs3087714 FP 5′- TTC CTG AAG CCA GAA TTG TTC-3′ 55 150 CviQI MK-2206 concentration CC:150 C>T RP 5′- TAT CAT CGG TGG GAT GAC AG-3′       CT:150/101/49             TT:101/49 Figure 1 SULF1 SNP information, effects on age of disease onset, survival, and promoter activity. (A) The gene structure, SNP location, predicted functionality of SNPs, and electrophoresis gel pictures; (B) Haplotype combination of rs2623047 and rs6990375 and age of disease onset; G-G: rs2623047G-rs6990375G; G-A/A-G: rs2623047G-rs6990375A and rs2623047A-rs6990375G; A-A: rs2623047A-rs6990375A; (C) Progression-free survival; rs2623047 AA vs. rs2623047 GG/GA; (D) HeLa, OVCA429,

and SKOV-3 cell lines were co-transfected with the rs2623047 G, or rs2623047 A constructor plasmid and Renilla-TK plasmids. The relative luciferase activity was assessed with the Renilla luciferase activity. Each experiment was performed in triplicate. * P < 0.05. Construction of Reporter Rucaparib Plasmids Reporter constructs were prepared for rs2623047 G>A by amplifying 1803 bp of the SULF1 promoter region (from -1784 to +18 relative to the transcription start site) with either rs2623047 G or A allele by using a pair of primers 5′-AAGAGCTCTTGGGAATGCCTCATAGACAG-3′ (forward) and 5′-AAGCTAGCGGTCTGAGAACTCCCAGTCAA-3′ (reverse). SacI and NheI restriction enzymes (New England BioLabs, Beverly, MA) were used to cleave the amplicons, and the pGL4 vector (Promega, Madison, WI) and T4 DNA ligase (New England BioLabs) were used for ligation. Transient Transfection and Luciferase Reporter Gene Assay The ovarian cancer cell lines OVCA429 and SKOV-3 were cultured in 1x McCoy’s 5A modified medium and minimum essential medium, and the human cervical cancer cell line HeLa was cultured in Dulbecco’s modified Eagle’s medium, supplemented with 10% fetal bovine serum (Sigma-Aldrich, MO) at 37°C with 5% CO2. The cultured cells were transiently transfected with 1.0 μg of rs2623047 G or rs2623047 A reporter constructs, using the FuGENE HD kit (Roche Applied Science, IN).

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